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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.08G146900.1.p |
Common Name | GLYMA_08G146900, LOC100804613 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 488aa MW: 55680.6 Da PI: 4.4838 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.08G146900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 264.5 | 3.6e-81 | 118 | 477 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
+lLl+ Aeav++++ la+ ++++l++ +s + ++Rla +ft+ L + ++ +el + ++s+ +++++ ++++++e+sP
Glyma.08G146900.1.p 118 ADLLLTGAEAVEAQNWPLASDIIEKLNNASSLENgdGLLNRLALFFTQSLYYKSTN-APELLQCGAVST-----HTNAFCVFQVLQELSP 201
679**************************88765434689***********99998.666665444444.....457888999******* PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
++kf+h+taNqaIlea+eg+e +HiiDfdi++G+QWp+L+ La + ++ slR+T++ ++ ++++++tg+rL++fA++++ pf f+
Glyma.08G146900.1.p 202 YVKFAHFTANQAILEATEGAEDLHIIDFDIMEGIQWPPLMVDLAMK-KSVNSLRVTAITV-NQRGADSVQQTGRRLKEFAASINFPFMFD 289
********************************************98.5668*********.55789************************ PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyys 265
l+++r ed++ eL g +l+Vn+++ + ++++s sl + ++L+ v +lsP++vv+ve+e + s sF+e f+eal++y+
Glyma.08G146900.1.p 290 QLMMEREEDFQGIEL----GQTLIVNCMI-HQWMPNRSFSLVK---TFLDGVTKLSPRLVVLVEEElfnfPRLKSMSFVEFFCEALHHYT 371
*****9999988777....99*******9.5667888899988...********************7553345999************** PP
GRAS 266 alfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrvee 353
al dsl+++l + e + +E+e++g +i + v + er+er+ W+e + + GFk vp+s+ + +qak l++ ++ gy v+
Glyma.08G146900.1.p 372 ALCDSLASNLWGSHkMELSLIEKEVIGLRILDSVRQFPCERKERMV----WEEGFYSlKGFKRVPMSTCNISQAKFLVSLFG-GGYWVQY 456
******888866663777899*********************9999....***997758***********************.89***** PP
GRAS 354 esgslvlgWkdrpLvsvSaWr 374
e+g l l+Wk+rpL+++S W+
Glyma.08G146900.1.p 457 EKGRLALCWKSRPLTVASIWE 477
********************5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 488 aa
Download sequence Send
to blast |
MKTMDFEQFY YSFGPPYMNQ LHECISENAF PFQTENLLSP NTFLDEMFDQ EYSMEGLLQQ 60 HANNQEDFGF LKHDDPLETE FCHGFSPSAE ENMHVSMEEG DSCLKGIQAE LMEETSLADL 120 LLTGAEAVEA QNWPLASDII EKLNNASSLE NGDGLLNRLA LFFTQSLYYK STNAPELLQC 180 GAVSTHTNAF CVFQVLQELS PYVKFAHFTA NQAILEATEG AEDLHIIDFD IMEGIQWPPL 240 MVDLAMKKSV NSLRVTAITV NQRGADSVQQ TGRRLKEFAA SINFPFMFDQ LMMEREEDFQ 300 GIELGQTLIV NCMIHQWMPN RSFSLVKTFL DGVTKLSPRL VVLVEEELFN FPRLKSMSFV 360 EFFCEALHHY TALCDSLASN LWGSHKMELS LIEKEVIGLR ILDSVRQFPC ERKERMVWEE 420 GFYSLKGFKR VPMSTCNISQ AKFLVSLFGG GYWVQYEKGR LALCWKSRPL TVASIWEPMA 480 YLDDKVK*
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