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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.08G041500.1.p |
| Common Name | GLYMA_08G041500, LOC100776092 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 314aa MW: 35222.5 Da PI: 9.1294 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.08G041500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 170.8 | 4.3e-53 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGf+FhPtdeel+++yL +kv++ ++ ++++ vd++k+ePwdLp k++ +ekewyfFs +d+ky+tg r+nrat+sgyWk+tgkdk
Glyma.08G041500.1.p 5 LPPGFKFHPTDEELITYYLLRKVSDVGFTS-KAVAVVDLNKSEPWDLPGKASMGEKEWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDK 93
79*************************999.88***************988999************************************ PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
e++ +g l+g+kktLvfy grap+gek++Wvmheyrl
Glyma.08G041500.1.p 94 EIFG-GGVLIGMKKTLVFYMGRAPRGEKSNWVMHEYRL 130
****.*******************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MEEKLPPGFK FHPTDEELIT YYLLRKVSDV GFTSKAVAVV DLNKSEPWDL PGKASMGEKE 60
WYFFSLKDRK YPTGLRTNRA TESGYWKTTG KDKEIFGGGV LIGMKKTLVF YMGRAPRGEK 120
SNWVMHEYRL ANKQPYRSSK EERVICRVFQ KSSAPKKPQQ TSSSQPSQES PTSMVNEFGD 180
VDLPNLNSIA NSSSSFTNNI AYNINGDPSN AVNTNMNLTM NWPSGFLNPN LSVNSLLLKA 240
SQLRNTYQQR EAATSSDHHF ATYVPQGFSH NNTIGTEHHL MTPNLSATSS SSKALEYSCV 300
PQQEQPFNMD SIW*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 9e-55 | 5 | 157 | 20 | 174 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 9e-96 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
