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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G235600.1.p |
Common Name | GLYMA_07G235600, LOC100789404 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HSF |
Protein Properties |
Length: 267aa MW: 30848 Da PI: 7.3826 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G235600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 116.3 | 1.9e-36 | 26 | 117 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91
Fl+k+y++++d+++++++sw e++++fvv+++ efa+++Lp+yFkh+nf+SFvRQLn+YgFkkv ++ weF++++F+kg k
Glyma.07G235600.1.p 26 FLTKTYQLVDDPHTDHIVSWGEDETTFVVWKPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANEYFRKGAK 106
9****************************************************************999.........************* PP
XXXXXXXXXXX CS
HSF_DNA-bind 92 ellekikrkks 102
+ll++i+r+k
Glyma.07G235600.1.p 107 HLLCEIHRRKA 117
********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MAFTLDRFEE NMVFTFESQK SVPAPFLTKT YQLVDDPHTD HIVSWGEDET TFVVWKPPEF 60 ARDLLPNYFK HNNFSSFVRQ LNTYGFKKVV ADRWEFANEY FRKGAKHLLC EIHRRKAPQQ 120 HHQLFHDQLP SQILQKDESL CWLDTPLPSS KPNTDILTAL SEDNQTLRRK NFMLLSELSH 180 MKSLYNDIIY FIQNHVKSPP FEQRSSSVIP KLVELDSLHE SPNDMGVLRT AKSCVVDKSL 240 VTSTEESNSS VKLFGVTLSG RKIAPR*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2ldu_A | 4e-21 | 21 | 115 | 16 | 120 | Heat shock factor protein 1 |
5d5u_B | 5e-21 | 21 | 115 | 25 | 129 | Heat shock factor protein 1 |
5d5v_B | 5e-21 | 21 | 115 | 25 | 129 | Heat shock factor protein 1 |
5d5v_D | 5e-21 | 21 | 115 | 25 | 129 | Heat shock factor protein 1 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000269|PubMed:16202242}. |