 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.07G228700.1.p |
Common Name | GLYMA_07G228700, LOC100810632 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
MYB |
Protein Properties |
Length: 437aa MW: 48353.2 Da PI: 6.506 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G228700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.2 | 2.9e-16 | 104 | 149 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++
Glyma.07G228700.1.p 104 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 149
899*****************************.***********996 PP
|
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 156 | 199 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+
Glyma.07G228700.1.p 156 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 199
678*******************.*********.***********96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MGMVYADMDS LSLCSNYGVV SSHQDNCYVS NGGTNWGFPF MRECPNFEDH PNNSDDVAEE 60 GKGSYSSGED SDKVNHNANN FNDENSPNEN SNSGGSGHSK LCARGHWRPA EDSKLKELVA 120 LYGPQNWNLI AEKLEGRSGK SCRLRWFNQL DPRINRRAFS EEEEERLMQA HRIYGNKWAM 180 IARLFPGRTD NAVKNHWHVI MARKYREQSS AYRRRLSQSS SVYRRVEELN TTTTTSSTLV 240 SRNTAAAEQQ PPPPYCLNLP NNGGLANNIN MPSSPYAATP FHGGVVAVAP SSGVEFGLLN 300 GSPHMTAAKE AFSTPKLVPH IALYPQQTPL DFFSGVRSSN DMVGEYFGQN DHHQPSFGFN 360 PQYPQYVMLM QQHQQNNHNY GFSNSTAQIL GHSEASLSSV AAEHRDHQNV SSDQCPPDAT 420 TTIPPPFIDF LGVGAT*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in organ boundaries. {ECO:0000269|PubMed:19542355}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor that involved in boundary specification, meristem initiation and maintenance, and organ patterning. Functions in both lateral organ separation and axillary meristem formation. {ECO:0000269|PubMed:19542355}. |