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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.07G228600.1.p |
| Common Name | GLYMA_07G228600, LOC100809025 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
MYB |
| Protein Properties |
Length: 423aa MW: 47087.8 Da PI: 6.1805 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.07G228600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 52.6 | 1.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l +++++G g+W++ +++ g+ R++k+c++rw +yl
Glyma.07G228600.1.p 14 KGPWTPEEDQKLMAYIEEFGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 50.9 | 3.6e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++ +E++ +++++++lG++ W++Ia+ ++ +Rt++++k++w+++l
Glyma.07G228600.1.p 67 RGKFSLQEEQTIIQLHALLGNR-WSAIAAQLP-KRTDNEIKNYWNTHL 112
89********************.*********.************996 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 423 aa
Download sequence Send
to blast |
MGRSPCCEKE GLKKGPWTPE EDQKLMAYIE EFGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIAAQLPKRT DNEIKNYWNT HLKKRLTRMG 120
IDPTTHKPKT DALGGSGGGQ TRDAANLSHM AQWESARLEA EARLVRESKL QVQNNLGSCS 180
STQPARLVLN KITTQQQPSL PPCLDILKAW QSSWNKPPQQ PTTKENNTKI MHSMYAMMLS 240
TDDTLESPTS TLCFPGTTTT TTMLPISNNI GLLFNENNNS NNNMYPLATT IDDGVFMKDN 300
TTTMLNLQMQ DDDIMAAVEA FRAYDNNSSR NKYNNNNVVV PPSLSNSVIL EGLNNDNDDN 360
SKAALVVYDS NDDLGTEEAD NLAIINGDGS LCNVNNLDEN NKHYWNNIFN LVNDPLSGSS 420
VF*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
