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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G224700.1.p |
Common Name | GLYMA_07G224700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
FAR1 |
Protein Properties |
Length: 580aa MW: 67656.1 Da PI: 7.33 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G224700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 48 | 4.1e-15 | 48 | 110 | 23 | 90 |
FAR1 23 krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
++++e++++++ Cs g++++++ + ++r++trtgC a++++++ ++++w++ ++el+H H+++
Glyma.07G224700.1.p 48 RKKKECYRAKLSCSSAGFKKKSEAN-----NPRPKTRTGCPAMIVIRMVESKRWRIVEVELQHDHQVS 110
67899***************99888.....9**********************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 580 aa
Download sequence Send
to blast |
MEEVCLNSEP LFDERNEVDV EGNSSIAEHD LESLNSQTNN SPLPTVDRKK KECYRAKLSC 60 SSAGFKKKSE ANNPRPKTRT GCPAMIVIRM VESKRWRIVE VELQHDHQVS PQSKRFYKSH 120 KEMILEASKS RPLPEPVTEV HTISHDTNFD KLKYLEHREG DGRAIYNYFC RMKLTDPNLF 180 YLFDIDDDGH LKNVFWADSR PRIAYNYFND TVTIDTNCLA NKYEIPLMSF VGINHHGHSV 240 LLGCGFLGHE SVDYFVWIFK AWLQCMLGRP PHVITDQCKP LQIAVARVFP HARHCYSLQY 300 IMQRVPEKLG GLQGYGPIRR KLYNAVYESL KIVEFESSWA DMIKCHGLVD NKWLQTLYKD 360 RHLWVPKTGP YDVFDGYVHK YTSFKEFLDK YDLALHRKHL KEAMADLESR KVSFELKTRC 420 NFEVQLAKGF TKEIFQKFQS EVDGMYSCFN TRQVSVNGSI ITYIVKESVE VEGNEKGVKS 480 FEDLYETTEL DIRCICSLFN YKGYLCKHAL NVLNYNSIEE IPSQYILNRW RRDFKQTFNQ 540 FHVSDNIDTY NPVDLYTHLF NSALPVLEVG AQSREHYMVA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |