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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G216000.1.p |
Common Name | GLYMA_07G216000, LOC100814923 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 232aa MW: 26161.6 Da PI: 9.6548 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G216000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W+++Ed++l+d++k++G +W+t ++ g++R++k+c++rw +yl
Glyma.07G216000.1.p 13 KGAWSKQEDQKLIDYIKKHGEVCWRTLPQAAGLHRCGKSCRLRWINYL 60
79******************99************************97 PP
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2 | Myb_DNA-binding | 51.4 | 2.4e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++
Glyma.07G216000.1.p 66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110
8999******************.*********.***********987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MRKPSCDIKD LNKGAWSKQE DQKLIDYIKK HGEVCWRTLP QAAGLHRCGK SCRLRWINYL 60 RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IRRKLISKGI 120 DPNNHRLKHT IPSSLQNSLM SDDSSKAFSM KDTNKNETSK LPRVYNHVEV SDAASGEAES 180 PCALPDLNLD LSITNPSASQ SISGNNVKPF HESNSSRKVQ FDSPSTLLLF Q*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expression in flowers increases as the flowers develop. {ECO:0000269|PubMed:1840903}. |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, stems, leaves, seed pods and flowers. {ECO:0000269|PubMed:1840903}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Function -- GeneRIF ? help
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- findings indicate that GmMYB100 is a negative regulator in soybean flavonoid biosynthesis pathway. [GmMYB100]
[PMID: 26231207]
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT135603 | 1e-119 | BT135603.1 Lotus japonicus clone JCVI-FLLj-12J12 unknown mRNA. |