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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.07G163700.3.p |
Common Name | GLYMA_07G163700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
B3 |
Protein Properties |
Length: 356aa MW: 40107.9 Da PI: 8.2019 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G163700.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 60.8 | 2.3e-19 | 221 | 312 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
vl ps+ + ++++lp +fae++ +g++ ++l+ ++gr+W+v++ yr+++ l++GW eF +n+L egD++vF+l + +e l
Glyma.07G163700.3.p 221 VLRPSYLYRGCIMYLPSTFAEKNlNGVSG---FIKLQLSNGRQWSVRCLYRGGR--AKLSQGWFEFTVENNLGEGDVCVFELLRMKEVVL 305
78899******************876743...59999999********665555..66***********************998899999 PP
EEEEE-S CS
B3 93 vvkvfrk 99
v+vfr
Glyma.07G163700.3.p 306 QVTVFRV 312
9999985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MYEGNSSFIV HIFNLSTSEV NYQSAMRNHN EGSCFANYHH IFDEMEDVDS LGLSDLSPQY 60 LTPGALQSKG FAGSVDQLTP GKSHTPALQN LFNGGSKLNR VNWGDGGSAF SLKDANSQGN 120 QSTRDIGVQF NAVEFKRSTE ELKLRYSNSN EEAVNKTAKK KRKSEPYGEE PSGENEEEAE 180 MRYRFYESAS ARKRTVTAEE RERAINASKT FEPTNPFCRV VLRPSYLYRG CIMYLPSTFA 240 EKNLNGVSGF IKLQLSNGRQ WSVRCLYRGG RAKLSQGWFE FTVENNLGEG DVCVFELLRM 300 KEVVLQVTVF RVTEDAGLLN QLPMQQQQQS PNISHTKLLN PHLQHRISTT KLIRN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4i1k_A | 2e-73 | 184 | 314 | 15 | 144 | B3 domain-containing transcription factor VRN1 |
4i1k_B | 2e-73 | 184 | 314 | 15 | 144 | B3 domain-containing transcription factor VRN1 |
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