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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G091400.1.p |
Common Name | COL21, GLYMA_07G091400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
CO-like |
Protein Properties |
Length: 428aa MW: 47923.4 Da PI: 4.6246 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G091400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 23.1 | 1.5e-07 | 16 | 61 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
+r C+ + + +++++C ++ +lC+ C H+ H++v+l
Glyma.07G091400.1.p 16 ARACESCLKVRARWYCAADDAFLCHGCDNMVHSAnqlasrHERVKL 61
578******99*********************66889999998875 PP
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2 | CCT | 67.6 | 3.5e-23 | 374 | 417 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk++
Glyma.07G091400.1.p 374 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRT 417
9*****************************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 428 aa
Download sequence Send
to blast |
MTNEMKEASA LGARTARACE SCLKVRARWY CAADDAFLCH GCDNMVHSAN QLASRHERVK 60 LQTASSKVNY SVTPKVAWHS GFTRKARTPR HNNNRHSSLK QQQQKKPLHE ERGEEEVFFN 120 NTISLLPLVP ELGSEEPLLN DETEEQLLCR VPVFDAELCS IYNEVKDEVV AAGEEALDLE 180 NFSSEFLPSD TDLAEFTADV KSFLGNGADE DSPDDDEHVK ESELLILDCK EEEGDEEMDE 240 CIDGVLIGAK DAMVKVKDEE ELDADDDTAC HLDSILDMNG EAFNWNIVES ESPAQAQEDE 300 VSKVGTKKDI FLRLNYEEVI TAWASQGSPW TNGTPPKFFN SDDCWLDFLG SNGGNVQCCY 360 GAVGSLRVHA DGGREARVSR YREKRRTRLF AKKIRYEVRK LNAEKRPRMK GRFVKRTPFV 420 GATALPA*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 384 | 400 | RRTRLFAKKIRYEVRKL |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HM068903 | 0.0 | HM068903.1 Glycine max CONSTANS-like zinc finger protein (COL21) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G25440.1 | 5e-80 | B-box type zinc finger protein with CCT domain |