PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G049100.1.p
Common NameGLYMA_07G049100, LOC100789928
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 385aa    MW: 43512.5 Da    PI: 5.5136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G049100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-13181232155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Glyma.07G049100.1.p 181 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 232
                          79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.38E-13179236No hitNo description
SuperFamilySSF474598.11E-17180247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.751180231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-13181246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-10181232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10186237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MERLQGPLNS CFFGDPLEVN CLDQVLVDEE SLRLEEEEQF LISSLEDNMP FLQMLQSVES  60
PQFFPLKEPN FQTLLRLQHM KKPWEGIAYI PRMEAQVQAA LELESCVTHD MLEMQSPVKS  120
ESNELQHPLS ISCFEKVNYE CNQEPQKVSQ TCPKSQPAAT RERRKRKRTR PSKNKEDVEN  180
QRMTHIAVER NRRRQMNDHL SVLRSLMPPS YIQRGDQASI IGGAIDFVKE LEQLLQSLEA  240
QKRMRKNEEG GGGSSSSTML CKPPPPSSLS SPHGYGMRSS TSDEVNCGDE VKAENKSEAA  300
DIKVTLIQTH VNLKIECQRR PGQLLKVIVA LEDLRLTILH LNITSSETSV LYSLNLKIEE  360
DCKLCSASDI AEAVHQIFSF INGS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162167RRKRKR
2181192RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G049100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352930.0AC235293.1 Glycine max strain Williams 82 clone GM_WBb0059D15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528761.10.0transcription factor bHLH57
TrEMBLI1KHN80.0I1KHN8_SOYBN; Uncharacterized protein
STRINGGLYMA07G05500.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Representative plantOGRP25315131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61950.18e-70bHLH family protein