 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.07G048100.1.p |
| Common Name | GLYMA_07G048100, LOC100786383 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
NAC |
| Protein Properties |
Length: 309aa MW: 34914.3 Da PI: 5.2502 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.07G048100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 126.3 | 2.4e-39 | 6 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWka 85
+G+ F+Pt+eelv++yLk+ + g++ ++ +vi+ +d+++vePwd p +++ ++ w+fFs+ d ky+++kr nr+tk g+Wka
Glyma.07G048100.1.p 6 VGLGFRPTEEELVDFYLKHMLLGNDPRA-HVIPVIDLCDVEPWDVPVmlaksssAIRFGDPYWFFFSPVDFKYSRSKRFNRTTKCGFWKA 94
6999*********************998.99***************536655544444888***************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tgkd+++ + +++++g+kktLv+y+gr + g+k++Wv+hey++
Glyma.07G048100.1.p 95 TGKDRDIRTGdTNTVIGTKKTLVYYQGRVSCGVKSNWVIHEYHA 138
********98566779**************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MDDDIVGLGF RPTEEELVDF YLKHMLLGND PRAHVIPVID LCDVEPWDVP VMLAKSSSAI 60
RFGDPYWFFF SPVDFKYSRS KRFNRTTKCG FWKATGKDRD IRTGDTNTVI GTKKTLVYYQ 120
GRVSCGVKSN WVIHEYHAVT FHESQRTFVL CCLIKKPGKA TEGGTDALIC DEGEPSRSMV 180
SDFENQATAE GIPSEGTFTG METIFQATPW AENCFSPIQQ SPTSIEQEGA SFPNYAFNNA 240
YFRNEDNVMR NPFETTKEDE FLNSILAGES IVINEENKHN FVHSSTQSES LKTILLKTRQ 300
LRMMGTKI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-26 | 7 | 162 | 20 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-26 | 7 | 162 | 20 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-26 | 7 | 162 | 20 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-26 | 7 | 162 | 20 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 9e-26 | 7 | 162 | 23 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 8e-26 | 7 | 162 | 20 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 8e-26 | 7 | 162 | 20 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
