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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G037100.1.p |
Common Name | GLYMA_07G037100, LOC100775511 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 649aa MW: 71432.1 Da PI: 6.7891 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G037100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.1 | 8.5e-08 | 533 | 581 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48
+WT E +lv++v + G g+W+ I r Rt ++k++w+++l
Glyma.07G037100.1.p 533 AWTLVEVIKLVEGVSRCGAGRWSEIKRLSFasySYRTSVDLKDKWRNLL 581
7**************************99999*99************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0031627 | Biological Process | telomeric loop formation |
GO:0000783 | Cellular Component | nuclear telomere cap complex |
GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 649 aa
Download sequence Send
to blast |
METVVGIEDN DDGKFEDSGV DRSSSALSSP KQIANPIVYK LVRVEGDGRL VPATDDEVME 60 VGDFLEYENS EMHVVANTGQ SLECISIERS SSGKLRLECK EGTAEADLGE LNAKLQILQK 120 VKEEKQRISC GSPAHSHVNI DSQCSADKFP VIDGKVQSET PCQEIPSIAS SLNYTHSNQS 180 GSIDQCSRPS EGVIESGSSA SAVYSNLKPD LSMSDGEICL DKLSIRELHE LFKVTFGRET 240 TVKDKQWLKR RIAMSLTNSC DVSATTFIIK NNKIVRKFEE ESSGNMNAGS LISSGNMTEE 300 EDVNFKDSSA VNACGIEDNQ VVSETRPEIG LEDENYQTGQ RAAKRIRRPT KRYIEELSEN 360 ESREHNPRLS ISNKPMGLGH VSPTLNVRPA RNAFSEVRTY GTRLDSLGGS DVQIPCVSRV 420 RRSRPRKDIA SLMKFHPTSM GEAEKLSNKL LEHSSDAGSE FPDKVLKSRM PSKFHQPSSS 480 EPVKEQCPVI GPVELRQELR PKRADPSSHT SDDNNIVTVP TAKGGMRRKH HRAWTLVEVI 540 KLVEGVSRCG AGRWSEIKRL SFASYSYRTS VDLKDKWRNL LKASFALTPA PADEGINLRK 600 HGTAPIPEKI LLRVRELAEM NSQVPPNYSS SQLASGGGSV HGDRSGYL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 420 | 426 | RRSRPRK |
2 | 420 | 427 | RRSRPRKD |
Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.24229 | 0.0 | cotyledon| flower| hypocotyl| leaf| root| somatic embryo |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ560707 | 0.0 | FJ560707.1 Glycine max transcription factor MYB884 mRNA, complete cds. |