PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G027200.1.p
Common NameGLYMA_07G027200, LOC100778376
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 342aa    MW: 38140.7 Da    PI: 6.2514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G027200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-12162207555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h ++ErrRR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+Lq
  Glyma.07G027200.1.p 162 HIMAERRRRQELTERFIALSATIPGL-----NKTDKASVLRAAIDYVKQLQ 207
                          999**********************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.71E-17156218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.434157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-17162219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.34E-12162211No hitNo description
PfamPF000105.0E-10162207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-15163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEESWENWHL HMETGCENDF LGKCHGTDDD EFFRDILQQP PPAAFSSESE SDHSFLAVQN  60
TSSIPNDGAV LSPRNYLVKS SSSNSLVSQN ASKRPRRLSS PRTYILSFDN STMVPATPET  120
RPRSSNNSPL PAKRALESPG PVARRPNQGA KKIRTSSQTI DHIMAERRRR QELTERFIAL  180
SATIPGLNKT DKASVLRAAI DYVKQLQERV QELEKQDKKR STESVIFIKK PDPNGNDEDT  240
TSTETNCSIL PEMEARVMGK EVLIEIHCEK ENGVELKILD HLENLHLSVT GSSVLPFGNS  300
ALCITITTQM GDGYQMTVND LVKNLRQLFS KSHVLSDSDP Y*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.262170.0flower| meristem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G027200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529790.10.0transcription factor bHLH18
TrEMBLI1KGX10.0I1KGX1_SOYBN; Uncharacterized protein
STRINGGLYMA07G03060.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Representative plantOGRP6561573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-44bHLH family protein