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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G017300.1.p |
Common Name | GLYMA_07G017300, LOC100804056 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 208aa MW: 22850.7 Da PI: 4.798 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G017300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57 | 4.7e-18 | 33 | 83 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g
Glyma.07G017300.1.p 33 PVYHGVRKRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALTIKG 83
68*****887.**********843...6**********************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MTQQTTTSSS SHSGPRAQAQ KQSKRPRDCS KHPVYHGVRK RNWGKWVSEI REPRKKSRIW 60 LGTFSTPEMA ARAHDVAALT IKGQSAILNF PEIADLLPRP VTCSPRDIQT AATAAASMVK 120 FDPVTQSSDS ETPESSELSE IVELPNIEDS SVDSTPEFVL VDVVDSWVFP PMGMGSEGIE 180 FCAAFSDELF PQQSFIGSEI EILPIWD*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031081 | 0.0 | KT031081.1 Glycine max clone HN_CCL_165 AP2-EREBP transcription factor (Glyma08g21650.1) mRNA, partial cds. |