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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G312900.1.p |
Common Name | GLYMA_06G312900, LOC100805804 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 515aa MW: 56769.4 Da PI: 4.7445 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G312900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 35 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed llv++v+++G g+W+++ ++ g+ R++k+c++rw ++l
Glyma.06G312900.1.p 35 KGPWTAAEDALLVNYVQKHGEGNWNAVQNYSGLSRCGKSCRLRWANHL 82
79******************************************9986 PP
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2 | Myb_DNA-binding | 49.5 | 9.6e-16 | 88 | 131 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+g++T+eE+ ++++++++G++ W++ a++++ gRt++++k++w++
Glyma.06G312900.1.p 88 KGAFTAEEERMIAELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 131
799*******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 515 aa
Download sequence Send
to blast |
MSQMTNEVDN NVHYDDQTGS QLNDDGNGVG VVLKKGPWTA AEDALLVNYV QKHGEGNWNA 60 VQNYSGLSRC GKSCRLRWAN HLRPNLKKGA FTAEEERMIA ELHAKMGNKW ARMAAHLPGR 120 TDNEIKNYWN TRMKRRRRAG LPLYPPEVLL QAFQERKHGQ GTGEISDGDG GHRDFLKKNN 180 YEIHDAIFDS LKENQGILPF LPDLPAISAN SFLPNGLGSP PYCNLLPSTL PNHDHLQEST 240 MSFIGSSELN SNRFYPFDHI KDNTSDKISE SFGLYSPLDR GVSHGSICYS HSLSNGNSST 300 SKPTSEAVKS ELPSLQIPET EFGSWGTSPP PPLNESLDVF IHSPQPPNAL DSGSSSPLNS 360 GLLDALLYQA NTLGCSKNNS SDKSSNSSIA TPGDRAECSA LNMYETEWED YADPLSPFGA 420 TSILNEHPVV STNGNSWDEW ELFQTFSENS AGNNERLQSI DQVWTPKSEN QSMSLLNFTL 480 PDVLITSDWH ELYSDHDSTN QAIMTEASDD ISGQ*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC187165 | 0.0 | AC187165.17 Glycine max cultivar Williams 82 clone gmw2-91b16, complete sequence. |