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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G300300.1.p |
Common Name | GLYMA_06G300300, LOC100777621 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 231aa MW: 26587.6 Da PI: 6.3974 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G300300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.8 | 9.1e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd++lv++++++G +W++ ++ g+ R++k+c++rw++yl
Glyma.06G300300.1.p 15 KGTWTPEEDKKLVEYITRYGHWNWRLLPKFAGLARCGKSCRLRWLNYL 62
799*****************99************************97 PP
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2 | Myb_DNA-binding | 59.7 | 6.3e-19 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ T+eE+e ++++++ lG++ W++Ia++m+ gRt++++k++w++
Glyma.06G300300.1.p 68 RGNYTKEEEETIIKLHRHLGNR-WSAIAARMP-GRTDNEIKNHWHTN 112
899*******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MMVRTPSCDK NGVKKGTWTP EEDKKLVEYI TRYGHWNWRL LPKFAGLARC GKSCRLRWLN 60 YLRPNLKRGN YTKEEEETII KLHRHLGNRW SAIAARMPGR TDNEIKNHWH TNLKKRSQQD 120 SVATESIVSN SNDQSPTEQP TANTTFQSFN STTQDCSPLS QHSSPSTSTV VSTENLVLME 180 DEFAFWDSDT DLMSGNFWLE PYMLDISYVP ASEPEYSSQV FDVELWSHDT *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 3e-39 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |