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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.06G187600.1.p |
| Common Name | GLYMA_06G187600, MYB183 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
MYB_related |
| Protein Properties |
Length: 295aa MW: 31869.7 Da PI: 8.9334 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G187600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 44.3 | 4.1e-14 | 81 | 125 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + ++ G+g+W+ I+r k+Rt+ q+ s+ qky
Glyma.06G187600.1.p 81 PWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 125
7*******************************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006338 | Biological Process | chromatin remodeling |
| GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
| GO:0035066 | Biological Process | positive regulation of histone acetylation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003682 | Molecular Function | chromatin binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0003713 | Molecular Function | transcription coactivator activity |
| GO:0004402 | Molecular Function | histone acetyltransferase activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MPLSSSSSSA VDSAVSGEIM LFGVRVVVDS MRKSVSMNNL SQYELPRDAA NAKDDAAGYA 60
SADDAAPINS DKNRDRKRGI PWTEEEHKLF LVGLQKVGKG DWRGISRNYV KTRTPTQVAS 120
HAQKYFLRRT NLNRRRRRSS LFDITTDSVS TTPMEEGVQI QHQDNVSLFH PVYPVTPEGS 180
NMNGFPKMSM YPKDVGSGVM SVQAGNPMET LTLGQGNVEQ NGPSTKLVCT TPIVPDHRGS 240
TVSDITASLS SIDPPTLSLG LSLSSSPRQT SSSIHAALHA LPYFNNQDSI ISAA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Binds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031190 | 0.0 | KT031190.1 Glycine max clone HN_CCL_89 MYB/HD-like transcription factor (Glyma04g34720.1) mRNA, partial cds. |
