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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G142100.1.p |
Common Name | GLYMA_06G142100, LOC100786198 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
WRKY |
Protein Properties |
Length: 332aa MW: 37140.4 Da PI: 5.8807 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G142100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.1 | 4.9e-30 | 174 | 234 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqKe+ gs+fprsYYrCt++ +C++kk+v+r +++p+++e+tY+g+H+++
Glyma.06G142100.1.p 174 EDGFTWRKYGQKEILGSKFPRSYYRCTHQklyECQAKKQVQRLDQNPNIFEVTYRGDHTCH 234
7****************************9999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MMEEVINSIR RACVLAQNLE QDLPNLANQP AMMSLSIDQI TEAFSGAKEK MLQFSRQNQT 60 SDESPPTLVH ETTQLQPQMD ATLMQEWLRS SHALTMDQLF QMHQFHAARS TLQIGEMGGR 120 DGEDNFERNK GPEEMQGINE SSSRPRRRSR EANQEKRKVM VPAPQFGNTE MPPEDGFTWR 180 KYGQKEILGS KFPRSYYRCT HQKLYECQAK KQVQRLDQNP NIFEVTYRGD HTCHMSSTAL 240 SSVPLQQLLV DITQNNSNTI SSQLSPTMNL SLHPGGGSGT AASSGGASAS RFGGDYPVVD 300 MADAMFNSRS SSNNSMEFLF SPEDKSDPKI E*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 5e-45 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |