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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G131500.1.p |
Common Name | GLYMA_06G131500 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Dof |
Protein Properties |
Length: 207aa MW: 22960.2 Da PI: 10.0003 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G131500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 126.7 | 7.2e-40 | 38 | 97 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s
Glyma.06G131500.1.p 38 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 97
7899******************************************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MDTAQWAQGI GVVKQPTMEG GSKPPPPPML ERRARPQKDQ ALNCPRCNST NTKFCYYNNY 60 SLSQPRYFCK TCRRYWTEGG SLRNVPVGGG SRKNKRSTPS APPPSSASAQ AKKLPDLTTP 120 NFPQSASQDP KIHQGQDLNL AYPPAEDYNT VSMSKLIEVP YNTELTRVAF IKTLLPHQHQ 180 HLHLLTISCL PWSFSRLGLL LLPQGV*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed at preprocambial stages first in wide domains, and later confined to sites of vein development. {ECO:0000269|PubMed:20563990}. |
Uniprot | TISSUE SPECIFICITY: Accumulates in the stele. {ECO:0000269|PubMed:20563990}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |