 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Glyma.06G097100.2.p |
| Common Name | GLYMA_06G097100 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
MYB_related |
| Protein Properties |
Length: 456aa MW: 49009.3 Da PI: 9.6532 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G097100.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 29.9 | 1.3e-09 | 50 | 95 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44
r++W++eEd +l av+++G g+W+t a+ +R++ q+ rw
Glyma.06G097100.2.p 50 RKAWSEEEDMQLRAAVQRWGEGNWATMAKGDDfpIKRSATQLAQRW 95
789************************9865555559999999998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0031627 | Biological Process | telomeric loop formation |
| GO:0000783 | Cellular Component | nuclear telomere cap complex |
| GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MCIRGCCMCE GTSFIFPVTV QRQTLPTISS TDGIETKGIV GGNMASKRKR KAWSEEEDMQ 60
LRAAVQRWGE GNWATMAKGD DFPIKRSATQ LAQRWSILRK KDGCTNTGTV TSTQYTTAEQ 120
LATRHSLSLA LDMPFKKLTA PGMTDVKPST SVKNQVQIRN TTEKVASSFV PPQQALLGSS 180
DLHAKSKLAD EKPVLKGNLI SDPVVKSATA TLGTRIDPLS NTISQIKVAQ VKNAIDTKPA 240
VSSLTKPSIS TNLPSDPKNK HVTPLADKGA QVKNAVDTTE PAVSSLTKPS ISTNLPSDPK 300
NKHATPLADK VPLKQDVNPT KELQVSNPST TPKEKLQENE PPKVTTGSQV DSNPEKGRLE 360
KGQETSIPLV KISGGEEVSK DKANQGVVCE EQGSVKKATE KNNIDKGSQS LEQDKKINSI 420
NQSSNDQNGN DKHVNLPVQD ELSQSAKVVK NDGEC*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015035 | 5e-58 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
