PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.06G049300.1.p

Common Name

GLYMA_06G049300, LOC102662483

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bHLH

Protein Properties

Length: 300aa MW: 33136 Da PI: 6.0018

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.06G049300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	3.9e-10	233	281	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +hn +Er RR++i +++ L+el+P + k Ka +L + ++Y++ Lq Glyma.06G049300.1.p 233 NSHNLAERVRREKISERMRLLQELVPGC----EKITGKAVMLDEIINYVQLLQ 281 58***********************9....677*************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.46E-17	227	294	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.03E-11	228	285	No hit	No description
PROSITE profile	PS50888	15.345	230	280	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.7E-16	231	293	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.8E-7	233	281	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.6E-9	236	286	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MGDLENALGL QSVSEMTVSS ASMAMPSGAA NPFLSSSAWD PLVPLSQTFG GSLVVSHSEF 60 AHSAYPFVMN CDSHFVQYVS DSNFEHMALK VPSIGQTGCY DIDNNIGYLP NHNPSNESGI 120 ERNQLNNEKS KHEDSTSEEG AAPGEHKRKR GLYYNVTFSS NKNAEGETLQ NSSGKSCDDV 180 KEQCEKKPKF AQNSAANLCG KQLLKHKKDD SESEEAPKEN FIHVRTRRGQ ATNSHNLAER 240 VRREKISERM RLLQELVPGC EKITGKAVML DEIINYVQLL QQQVEFLSMK LATVNSIEF*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.32849	6e-75	epicotyl\| flower\| hypocotyl\| root

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.06G049300.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014632747.1	0.0	transcription factor bHLH74
Refseq	XP_028235005.1	0.0	transcription factor bHLH74-like
TrEMBL	A0A445K4X1	0.0	A0A445K4X1_GLYSO; Transcription factor bHLH74
TrEMBL	K7KT59	0.0	K7KT59_SOYBN; Uncharacterized protein
STRING	GLYMA06G05181.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF26541	2	3
Representative plant	OGRP58	16	313

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	9e-53	bHLH family protein

Link Out ? help Back to Top
Phytozome	Glyma.06G049300.1.p
Entrez Gene	102662483