PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G040400.1.p
Common NameGLYMA_06G040400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 330aa    MW: 35882.5 Da    PI: 10.9864
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G040400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15.2e-15251300554
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                          +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+  e+ +
  Glyma.06G040400.1.p 251 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQAEIME 300
                          69***************************************998777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF819951.05E-6100164No hitNo description
SMARTSM003383.0E-14247312IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.381249300IPR004827Basic-leucine zipper domain
CDDcd147071.47E-25251305No hitNo description
SuperFamilySSF579592.75E-11251300No hitNo description
PfamPF001707.1E-13251301IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.0E-15251300No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MRFGRTFSKE YGGLGGPNLA AQTQRQPTLR EMTLEEFLVR AGVVREDVKP NDGVFVDLSR  60
VGNNNSDLGL GFQQMNKVAA AAATGLMGNR LNNDPLVGLQ SSANLPLNVN GVGASNQQPQ  120
MQSPQHQHQQ QHQHQQLHQQ QQQPQIFPKQ STMTYAAAQM PQGMVRGGVV GLGGGDQSLS  180
VQGGGIGGMV GLAPGSVHVA TGSPAANQLS SGDRIGKSNG DTSSVSPVPY VFNGGLRGRK  240
SGGAVEKVIE RRQRRMIKNR ESAARSRARK QAYTMELEAE VAKLKEENEE LQKKQAEIME  300
IQKNQVKEMM NLQREVKRRR LRRTQTGPW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316320KRRRL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.224710.0leaf| seed coat| stem
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}.
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G040400.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312540.0KT031254.1 Glycine max clone HN_WYQ_11 BZIP transcription factor (Glyma06g04353.1_like1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001341123.10.0transcription factor bZIP71
RefseqXP_028234907.10.0bZIP transcription factor 23-like
RefseqXP_028234908.10.0bZIP transcription factor 23-like
SwissprotQ9M7Q47e-72AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLK7KT000.0K7KT00_SOYBN; Uncharacterized protein
STRINGGLYMA06G04353.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Representative plantOGRP39841024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.12e-34abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]