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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.06G029200.1.p |
| Common Name | GLYMA_06G029200, LOC100807944 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
TALE |
| Protein Properties |
Length: 448aa MW: 50078.9 Da PI: 6.5105 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G029200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 30.1 | 8.3e-10 | 370 | 407 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +e+ LA+++gLt++qV++WF N R +
Glyma.06G029200.1.p 370 FEHflHPYPNDSEKLMLASQTGLTKNQVSNWFINARVR 407
554459******************************88 PP
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| 2 | BELL | 101.5 | 6e-33 | 233 | 303 | 2 | 72 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
++e+q+k+a+L++ll+eV+ r ++y++q++ v+ssFe++aglg+ak+Yt+lAl+a+SrhF +L+dai ++i
Glyma.06G029200.1.p 233 KHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKSYTALALQAMSRHFCSLRDAILSHI 303
689****************************************************************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 448 aa
Download sequence Send
to blast |
MSNSITHLQN QFENQDLDTY GSSMRHNNAS FPEASLGAFP TSIGVVAEGS EISHTRHLMD 60
LLGAAANERN HHQTAQGLSL SLGSHMLVPS DEYRHHQRPL NPGLINPNYF MSGQEPREAC 120
NNPPVEQQHN ITSDYFFNTA GSCTFASSSS SAPLNRSPNT TTSYAAESFA AVIGNSRYLK 180
PVQSLLEDLV DVGGNVVDRI NDKYAEKLFR GSRGSARTLS SELRNNGHLL AGKHEHQIKI 240
ARLITLLDEV EGRCEKYYHQ MEEVVSSFEM IAGLGAAKSY TALALQAMSR HFCSLRDAIL 300
SHINAEKRKL FQDLPKISSG LSQLSLFDRD SRQSRMSLQQ LGVIQSQRQV WRPIRGLPET 360
SVAILRSWLF EHFLHPYPND SEKLMLASQT GLTKNQVSNW FINARVRLWK PMIEEMYKEE 420
FGESSEDSNP AGNNYLTRED TTDCVED*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3k2a_A | 3e-16 | 357 | 415 | 5 | 63 | Homeobox protein Meis2 |
| 3k2a_B | 3e-16 | 357 | 415 | 5 | 63 | Homeobox protein Meis2 |
| 4xrm_A | 2e-16 | 357 | 415 | 5 | 63 | Homeobox protein Meis2 |
| 4xrm_B | 2e-16 | 357 | 415 | 5 | 63 | Homeobox protein Meis2 |
| 4xrs_A | 2e-16 | 357 | 414 | 1 | 58 | Homeobox protein Meis1 |
| 4xrs_B | 2e-16 | 357 | 414 | 1 | 58 | Homeobox protein Meis1 |
| 5bng_A | 2e-16 | 357 | 415 | 1 | 59 | Homeobox protein Meis2 |
| 5bng_B | 2e-16 | 357 | 415 | 1 | 59 | Homeobox protein Meis2 |
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