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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.05G245900.1.p |
Common Name | GLYMA_05G245900, LOC100777274 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
WOX |
Protein Properties |
Length: 360aa MW: 40876.6 Da PI: 8.911 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.05G245900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 69.6 | 3.7e-22 | 82 | 141 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++
Glyma.05G245900.1.p 82 SRWNPTPEQLRALEELYRRgTRTPSAEQIQQITAQLrrfgKIEGKNVFYWFQNHKARERQ 141
7*****************99**************************************97 PP
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2 | Wus_type_Homeobox | 114.7 | 4.6e-37 | 81 | 143 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+
Glyma.05G245900.1.p 81 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKR 143
79***********************************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MWMVGYNEGG EFNMADYGFN GRKLRPLMPR PVTSPNNTSN TNSPCLSRIH HGNNFFSQYH 60 NLASVADQGK REFNPPPVVV SSRWNPTPEQ LRALEELYRR GTRTPSAEQI QQITAQLRRF 120 GKIEGKNVFY WFQNHKARER QKRRRQMESA AEGHHTRDFD STLEKKDLGA SRTVFEVDQT 180 KNWAPSTNCS TLAEESVSIQ RAAKAAIAEC RTDGWLQFDE GELQHRRNFM ERNATWHMMQ 240 LSCPPPPTVS PHLINTSPIT STTSMATATT VTARLMDPKL IKTHDLSFFT SPNRENGIIH 300 LSSISTQDDN SVESQTLQLF PTRNADRSSD NINQQKETEV SVSAMNAPSQ FFEFLPLKN*
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