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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.05G109200.1.p |
Common Name | GLYMA_05G109200, LOC100792374 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 336aa MW: 38201.9 Da PI: 8.3182 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.05G109200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.3 | 3.1e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl
Glyma.05G109200.1.p 14 RGPWSPEEDTRLKSYIEEHGTGgNWIALPQKLGLKRCGKSCRLRWLNYL 62
89*********************************************97 PP
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2 | Myb_DNA-binding | 39.5 | 1.3e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g++++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++
Glyma.05G109200.1.p 69 GNFSEEEDNIICSLYVTIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
89*******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKRGPWSPE EDTRLKSYIE EHGTGGNWIA LPQKLGLKRC GKSCRLRWLN 60 YLRPNIKHGN FSEEEDNIIC SLYVTIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGK 120 QRKLEQQAQA RKVFNQKQQI KRESEDLMLP VGVTTRTPYW PEQQYSWPIP VANNASIQYS 180 NLNNNNQTSS FSKHFPNNIV TATTMNSQHS SRDISLTQNQ LHDLHPSTLM NMISTDTCHT 240 SNVFQGFVNF SSDFPCVNQQ QIDGTMRVFY GLETMDMATN GSTNTTSTES TSWGDINSLV 300 YSPLLVSDHE ACQQRIIMPQ DVTFEESSCF AMQRQ*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Accumulates in an adaxial ball-shaped set of cells in three to five cell layers around the L3 layer of the shoot apical meristem (SAM) in youg plantlets. In the inflorescence meristem, confined to the axils of flower primordia. {ECO:0000269|PubMed:16461581}. |
Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:16461581}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator (By similarity). Positively regulates axillary meristems (AMs) formation and development, especially during inflorescence. {ECO:0000250, ECO:0000269|PubMed:16461581}. |