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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.04G242200.1.p |
Common Name | GLYMA_04G242200, LOC100817328 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 339aa MW: 39008.9 Da PI: 8.9232 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.04G242200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57 | 4.5e-18 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++
Glyma.04G242200.1.p 15 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 60
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 60.2 | 4.3e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+
Glyma.04G242200.1.p 67 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 110
679*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MEDSSAGEDT RTCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSG KSCRLRWFNQ 60 LDPRINRRPF TEEEEERLLA AHRIHGNKWA LIARLFPGRT DNAVKNHWHV IMARKQREQS 120 KLCGKRSFQD VYNDSNNTFL EKRTTPQSHH QDMLFSTTRF GLENGRFFDF RSLDNNKDDD 180 NNYRIVSDTT SSTSLASWNF ASVPTTTSTT TKGARDYFNT SRSSSVYLSE CSRSSDRSFL 240 YRIYPNPAFS LPNYKRVVPT SPFRTFLGSS DHHDGRIIKR DLMSFCDNNN NNSSSTFSKL 300 KASTEKDHQQ QQTNEDETNV EPKEVPFIDF LGVGVSSS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 1e-159 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |