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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.04G238700.1.p |
| Common Name | GLYMA_04G238700, Glyma04g41740.1, LOC100811972 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
ERF |
| Protein Properties |
Length: 325aa MW: 36400.6 Da PI: 4.9489 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.04G238700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.1 | 1.2e-19 | 101 | 151 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g
Glyma.04G238700.1.p 101 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIRLRG 151
59********.**********82....35*************************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MEDSILCKHT VHRSVTKKLI SPKKSSQTNS STQTERRIVR ISYTDPDATD SSSDEEGFPL 60
VRKRMKRYVN QIEIETAAEK VVRKRPAGEP CRRPAKLHSG KKFRGVRQRP WGKWAAEIRD 120
PARRVRLWLG TYDTAEEAAM VYDNAAIRLR GPDALTNFLT PPQRESPSQA TTVAVTEEAS 180
GSGYDSGDDH CQHNLSSPTS VLHFRSNSES DQKSEQVLRE CEGEGEFLAL DNMPLPAWDE 240
VFNFETPEYP PLLFQEGNFL HDYQSQMLGE TVPFSSDQGF SDSSIVLADS LIDFDKACPP 300
PSTLCQVDDF FQDILLASDP LVLL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16832061}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031078 | 0.0 | KT031078.1 Glycine max clone HN_CCL_184 AP2-EREBP transcription factor (Glyma04g41740.1) mRNA, partial cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Chai C, et al.
Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
BMC Genomics, 2015. 16: p. 596
[PMID:26268547] - Zwack PJ,Compton MA,Adams CI,Rashotte AM
Cytokinin response factor 4 (CRF4) is induced by cold and involved in freezing tolerance.
Plant Cell Rep., 2016. 35(3): p. 573-84
[PMID:26650835] - Raines T, et al.
The cytokinin response factors modulate root and shoot growth and promote leaf senescence in Arabidopsis.
Plant J., 2016. 85(1): p. 134-47
[PMID:26662515]
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