PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.04G221800.1.p
Common NameGLYMA_04G221800, LOC102665898
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 259aa    MW: 28634.4 Da    PI: 9.1628
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.04G221800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.6e-11107149143
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 
                          + +WT  E+el+  +  ++G g+W++Iar + +++t+ q++s+
  Glyma.04G221800.1.p 107 KEPWTHREHELFFVGLIKYGRGHWSKIARQFLLNKTPHQVQSY 149
                          679*************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.874105158IPR017884SANT domain
SMARTSM007171.7E-5106156IPR001005SANT/Myb domain
PfamPF002491.5E-7107149IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.2E-9107148IPR009057Homeodomain-like
CDDcd001673.02E-8109149No hitNo description
SuperFamilySSF466892.24E-10109157IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MVAEIIDLSD SPPSSPSSSH NTAARILNFD SVSNGKIQFE KVIPISLMAC TNTNQPQSTL  60
WAASGHTNEH SQIATTFQPS MQQRVATVLE PVPESITCMF PHGARLKEPW THREHELFFV  120
GLIKYGRGHW SKIARQFLLN KTPHQVQSYG ASFFRHLPST HLHGFRRRKP TYSTSSLMPK  180
NNNLMAASVS MPMIVNELQQ QTHMLFPENA PFLLAPSHGE ASSSNNTTMY GFQMQTGGAR  240
TSMNASANGE VDLELRLG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.04G221800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006578839.10.0myb-like protein J
TrEMBLK7KLN30.0K7KLN3_SOYBN; Uncharacterized protein
STRINGGLYMA04G39975.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14942612
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.11e-12MYB family protein