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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.04G199000.1.p |
Common Name | GLYMA_04G199000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
NAC |
Protein Properties |
Length: 170aa MW: 18797.8 Da PI: 5.2415 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.04G199000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 43 | 1.4e-13 | 28 | 73 | 85 | 128 |
NAM 85 atgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
atg+dk + s+ + gl+ktLvfy+g++p+g++tdWvmheyrl
Glyma.04G199000.1.p 28 ATGSDKIISSSvsNIGFAGLRKTLVFYEGKSPNGSRTDWVMHEYRL 73
5888888888643444499*************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MERINFIENG VSGLPPGFRF QPTDEELATG SDKIISSSVS NIGFAGLRKT LVFYEGKSPN 60 GSRTDWVMHE YRLNYANEIG EWILCRIFMK KRNIESDNNT TAPRKNNNAV MNNVEVAQPR 120 FFDFLSVHNS APPAPIQYSS TSSSCSSSNN VVEASSPNHE ETSGYADFC*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-16 | 28 | 91 | 100 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-16 | 28 | 91 | 100 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-16 | 28 | 91 | 100 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-16 | 28 | 91 | 100 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swm_B | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swm_C | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swm_D | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swp_A | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swp_B | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swp_C | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
3swp_D | 4e-16 | 28 | 91 | 103 | 169 | NAC domain-containing protein 19 |
4dul_A | 4e-16 | 28 | 91 | 100 | 166 | NAC domain-containing protein 19 |
4dul_B | 4e-16 | 28 | 91 | 100 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC235908 | 1e-161 | AC235908.2 Glycine max clone GM_WBc0208D21, complete sequence. |