 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Glyma.04G177300.1.p |
| Common Name | GLYMA_04G177300, Glyma04g34720.1, MYB143 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
MYB_related |
| Protein Properties |
Length: 293aa MW: 31797.8 Da PI: 8.4622 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.04G177300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 44.3 | 4.1e-14 | 81 | 125 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + ++ G+g+W+ I+r k+Rt+ q+ s+ qky
Glyma.04G177300.1.p 81 PWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 125
7*******************************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006338 | Biological Process | chromatin remodeling |
| GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
| GO:0035066 | Biological Process | positive regulation of histone acetylation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003682 | Molecular Function | chromatin binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0003713 | Molecular Function | transcription coactivator activity |
| GO:0004402 | Molecular Function | histone acetyltransferase activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MLLSSSCSAA GSAVSGEIML FGVRVVVDSM RKSVSMNNLS QYELPRDAAN AKDDVAAGYA 60
SADDAAPINS GKNRDRKRGI PWTEEEHKLF LVGLQKVGKG DWRGISRNYV KTRTPTQVAS 120
HAQKYFLRRT NLNRRRRRSS LFDITTDSVS TTPVEEGQIQ HQDNVSLFRP VYPVTPEGSY 180
MNGFPMMSMY PKDVGSRVMS VQAGNPMETL TLEQGNVEQN DPSTKLVCTI PIVPDHSGST 240
VSDITASLSS IDPPTLSLGL SLSSSQRQTS STHSALHALP CFNNQDSIIS VA*
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| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.4660 | 0.0 | cotyledon| pod| root| somatic embryo| stem |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031190 | 0.0 | KT031190.1 Glycine max clone HN_CCL_89 MYB/HD-like transcription factor (Glyma04g34720.1) mRNA, partial cds. |
