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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.04G138900.1.p |
Common Name | GLYMA_04G138900, LOC106798410 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 444aa MW: 50345.1 Da PI: 6.9731 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.04G138900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 387.3 | 1.7e-118 | 24 | 439 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
++lL++cA++v+sg+ ++a+ L+ + +++spdg+++qR+++yf eAL r+ ++ +++yk+l+ps+ts sse + ++k+f+e++P+l
Glyma.04G138900.1.p 24 ISLLIDCAKCVASGSIKNADIGLEYIYQISSPDGNAVQRMVTYFSEALGYRIIKNLPGVYKSLNPSKTS--LSSEDILVQKYFYELCPFL 111
579**************************************************************9998..79***************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
kfs+l++N+aI ea+e e+ vHiiD+ +++QW+ Ll ++ +R++gpp+l+iTg+++ +ke l +++ L+ A +l+ p++f +
Glyma.04G138900.1.p 112 KFSYLITNHAIAEAMECEKVVHIIDLHCCEPTQWIDLLLTFKNRQGGPPHLKITGIHE----KKEVLDQMNFHLTTEAGKLDFPLQFYP- 196
**********************************************************....9**************************. PP
GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrll........................................................d 215
v+++led+++e+L vk g+ala+ +vlqlh+ll
Glyma.04G138900.1.p 197 VVSKLEDVDFEKLPVKIGDALAITSVLQLHSLLatdddmagrispaaaasmnvqralhmgqrtfaewlerdminaytlspdsalsplslG 286
799*****************************************************************************9997764444 PP
GRAS 216 esvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
s + +L+++++l+Pk+vv++eqe+++n+++++er+ +al++ysalfd+l++++ ++s er+k+E +llg++i+n++aceg +r
Glyma.04G138900.1.p 287 ASPK----MGIFLNAIRKLQPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLDSTVMKTSVERQKLESKLLGEQIKNIIACEGVDR 372
4444....566******************************************************************************* PP
GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+erhe+lekW +rle+aGF++vpls++ +ak ll++++++ y+ ee+++l+ +W+drpL+svSaW
Glyma.04G138900.1.p 373 KERHEKLEKWIRRLEMAGFEKVPLSYNGRLEAKNLLQRYSNK-YKFREENDCLLVCWSDRPLFSVSAW 439
****************************************66.************************* PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MDGLGSPSQW LRELRWDSQG LNPISLLIDC AKCVASGSIK NADIGLEYIY QISSPDGNAV 60 QRMVTYFSEA LGYRIIKNLP GVYKSLNPSK TSLSSEDILV QKYFYELCPF LKFSYLITNH 120 AIAEAMECEK VVHIIDLHCC EPTQWIDLLL TFKNRQGGPP HLKITGIHEK KEVLDQMNFH 180 LTTEAGKLDF PLQFYPVVSK LEDVDFEKLP VKIGDALAIT SVLQLHSLLA TDDDMAGRIS 240 PAAAASMNVQ RALHMGQRTF AEWLERDMIN AYTLSPDSAL SPLSLGASPK MGIFLNAIRK 300 LQPKLVVITE QESNLNGSNL MERVDRALYF YSALFDCLDS TVMKTSVERQ KLESKLLGEQ 360 IKNIIACEGV DRKERHEKLE KWIRRLEMAG FEKVPLSYNG RLEAKNLLQR YSNKYKFREE 420 NDCLLVCWSD RPLFSVSAWS FRR*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, root epidermis, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |