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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.04G078300.3.p |
| Common Name | GLYMA_04G078300 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
bZIP |
| Protein Properties |
Length: 218aa MW: 23941.6 Da PI: 6.2832 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.04G078300.3.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 44 | 4.9e-14 | 128 | 179 | 3 | 54 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
+ kr rrk +NR +ArrsR+RK+a++ eLe v++L+ eN +L k+ ++
Glyma.04G078300.3.p 128 DMKRLRRKVSNRDSARRSRRRKQAQLSELELQVEKLKVENATLYKQFTDASQ 179
68*****************************************987665555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0071333 | Biological Process | cellular response to glucose stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MATTTTEFDL DYEFPDLDYD LRYLSLAGID ALTAFQNLLP DAAMTSFSAC GLIDPHCSQN 60
LTPMHSTITA TIDSQSTICA TSNVGSPISA NKPEGRENRT KGATSGSSEP SDEDDEAGAC 120
EQSTNPADMK RLRRKVSNRD SARRSRRRKQ AQLSELELQV EKLKVENATL YKQFTDASQH 180
FREADTNNRV LKSDVEALRA KVRKGVVTKN KGSLVFN*
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| Nucleic Localization
Signal ? help
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| No. |
Start |
End |
Sequence |
| 1 | 132 | 148 | RRKVSNRDSARRSRRRK |
| 2 | 142 | 149 | RRSRRRKQ |
| 3 | 144 | 149 | SRRRKQ |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in developing seeds from 10 to 30 days after flowering (DAF). {ECO:0000269|PubMed:11133985}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
| Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
J. Biol. Chem., 2001. 276(17): p. 14139-52
[PMID:11133985] - Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764]
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