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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.04G044800.1.p |
Common Name | GLYMA_04G044800, LOC100800624 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
LBD |
Protein Properties |
Length: 186aa MW: 20303.4 Da PI: 8.7907 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.04G044800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 86.8 | 2.9e-27 | 19 | 120 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
+C++C+vlr++C++ C l+ + p++q++++ +++k+FG+s ++ +++++p ++r+++++sl++eA+ r+ +Pv+Gavg++l++++
Glyma.04G044800.1.p 19 SCNGCRVLRKRCSERCSLRSSLnwidcPHAQAHATLFLAKFFGRSDLMFFISSVPLNNRPALFQSLLFEACGRTVNPVNGAVGLLLSGNW 108
6***************************************************************************************** PP
DUF260 86 qleqlkaelall 97
+++q++++++l+
Glyma.04G044800.1.p 109 HVCQAAVHTVLA 120
*****9887765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MVFLYDKDSP RQQKRKSMSC NGCRVLRKRC SERCSLRSSL NWIDCPHAQA HATLFLAKFF 60 GRSDLMFFIS SVPLNNRPAL FQSLLFEACG RTVNPVNGAV GLLLSGNWHV CQAAVHTVLA 120 GGVLRPLSEV VAPSESMFSH QFQSLASDSL KRSSDATAPV MSTMVSGESE ICSSDDGKKL 180 LNLFV*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |