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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G263700.2.p |
Common Name | GLYMA_03G263700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 345aa MW: 37947 Da PI: 4.7087 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G263700.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 98 | 147 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++g
Glyma.03G263700.2.p 98 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 147
69*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MCGGAIISDF IPAAAIAGSR RLTADYLWPD LKKRKSDLDV DFEADFRDFK DDSDIDDDDD 60 DHQVKPFAFA ASSLSTAAKS VAFQGRAEIS ANRKRKNQYR GIRQRPWGKW AAEIRDPRKG 120 VRVWLGTFNT AEEAARAYDA EARRIRGKKA KVNFPEAPGT SSVKRSKVNP QENLKTVQPN 180 LGHKFSAGNN HMDLVEQKPL VSQYANMASF PGSGNGLRSL PSSDDATLYF SSDQGSNSFD 240 YAPEISSMLS APLDCESHFV QNANQQQPNS QNVVSIEDDS AKTLSEELVD IESELKFFQM 300 PYLEGSWGDT SLESLLSGDT TQDGGNLMNL WCFDDIPSMA GGVF*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.31063 | 0.0 | cotyledon| epicotyl| flower| hypocotyl| leaf| meristem| pod| root| stem |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031075 | 0.0 | KT031075.1 Glycine max clone HN_CCL_34 AP2-EREBP transcription factor (Glyma03g42450.1) mRNA, partial cds. |