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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.03G218200.1.p |
| Common Name | GLYMA_03G218200, LOC100788260 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
MYB |
| Protein Properties |
Length: 360aa MW: 40983.4 Da PI: 4.5522 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.03G218200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 48.5 | 2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+grWT+eEd++l ++++ G g+W++ + g+ R++k+c++rw +yl
Glyma.03G218200.1.p 14 KGRWTEEEDDILTKYIQANGEGSWRSLPTNSGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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| 2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ + eE+ +++++++ +G++ W++Ia++++ gRt++++k++w+++l
Glyma.03G218200.1.p 67 RGNISFEEESIILKLHASFGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112
788899****************.*********.************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MVRAPCCEKV GLKKGRWTEE EDDILTKYIQ ANGEGSWRSL PTNSGLLRCG KSCRLRWINY 60
LRADLKRGNI SFEEESIILK LHASFGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYTFH 120
GTTSTSKDII ITLPPRRKRG RSSRWAMKKN KQQQIHTTHN NEVAVPLPPT PPLIETEKYL 180
STNIMLMEEQ FDGSSTASTI THQHENNINT TQEEEEEQNV GVEEGEKEEI INEDIWGPCD 240
EEVINGGEVV LNFDDIMDNC YFQEASGVWT ISDHEQRESN DNINVAGNEK GVDDTCTNIV 300
MSSGDDDQLH SSSFMASGLD QNLLTWLWED EDWETDLQSL GEIHSDKLKA MVDWFLSSS*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gv2_A | 1e-22 | 12 | 116 | 2 | 105 | MYB PROTO-ONCOGENE PROTEIN |
| 1h88_C | 4e-22 | 12 | 116 | 56 | 159 | MYB PROTO-ONCOGENE PROTEIN |
| 1h89_C | 4e-22 | 12 | 116 | 56 | 159 | MYB PROTO-ONCOGENE PROTEIN |
| 1h8a_C | 2e-22 | 12 | 116 | 25 | 128 | MYB TRANSFORMING PROTEIN |
| 1mse_C | 1e-22 | 12 | 116 | 2 | 105 | C-Myb DNA-Binding Domain |
| 1msf_C | 1e-22 | 12 | 116 | 2 | 105 | C-Myb DNA-Binding Domain |
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