PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G191700.1.p
Common NameGLYMA_03G191700, LOC100815903
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 583aa    MW: 66759.9 Da    PI: 6.6442
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G191700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix95.26e-30121206187
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                          rW++qe+l+L+e+r++++++++++++k+plW+evs++m +e+g++rs k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  Glyma.03G191700.1.p 121 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRNMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 206
                          8*************************************999*****************************98..55667*******85 PP
2trihelix51.33e-16425508284
             trihelix   2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                          W+++e+  L ++r eme+r+ + g +++  Wee++ km+  g+ers+   kekwe+++  y + ++  +k+++e+s++c yfd+
  Glyma.03G191700.1.p 425 WPESEIARLQQLRAEMETRYMQsGFSEEVMWEEIATKMACFGYERSALVFKEKWESISSNYARSAKDGSKKRKEDSRSCFYFDN 508
                          *******************997256899*********************************999888888889*********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.294114179IPR017877Myb-like domain
SMARTSM007170.12118181IPR001005SANT/Myb domain
PfamPF138371.6E-20121207No hitNo description
CDDcd122038.60E-21121186No hitNo description
SMARTSM0071723421484IPR001005SANT/Myb domain
PfamPF138372.9E-10423510No hitNo description
PROSITE profilePS500905.552424482IPR017877Myb-like domain
CDDcd122031.09E-15425488No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    Send to blast
MEMEDHHRHH HQYGITDLRQ LVNGPRPTHF PTMPPPPKAE LFPGDSNLQA ATQQHYEMMM  60
FGRQVADIMP PRCLHDFAST DSATNIAVAT PTTTPSASTP PLSCLEAETA GCIGGDASTG  120
RWPRQETLTL LEIRSRLDSK FKEANQKGPL WDEVSRNMSE EHGYQRSGKK CREKFENLYK  180
YYKKTKEGKA GRQDGKHYRF FRQLEALYGE NSNQASVPET NFGSGSLRFH TSSHNNNPSQ  240
TNQEMFQSQK HCDSLSLTNS TDLDTSSSDD NDQNSTGREL NKDNDSMEKR RKRVSGRSWK  300
VKIKDFIDSQ MRKLVEKQEE WLDKLTKTLE QKEKERVLRE EEWRRQESVR LEREHKFWAK  360
ERAWIEARDA ALMEALHKLT RNEIMKSTHS HEGLMVTGIQ IHSENQNEDG SEILNSTAAR  420
GAESWPESEI ARLQQLRAEM ETRYMQSGFS EEVMWEEIAT KMACFGYERS ALVFKEKWES  480
ISSNYARSAK DGSKKRKEDS RSCFYFDNSD QSSLYNQGGA YCDINDQRHE TGRLQTNDGS  540
SPSNSNVGNA VAGDNCFPFL MTEGGNLWEN YSLKVNKACQ NQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.193180.0hypocotyl| leaf| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G191700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003521447.20.0trihelix transcription factor PTL
TrEMBLI1JPY00.0I1JPY0_SOYBN; Uncharacterized protein
STRINGGLYMA03G34960.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20223489
Representative plantOGRP8402716
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-128Trihelix family protein