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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G145800.1.p |
Common Name | Glyma03g30200.1, LOC100784703 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HD-ZIP |
Protein Properties |
Length: 289aa MW: 31674.8 Da PI: 8.2049 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G145800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.7 | 1.7e-17 | 127 | 181 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+q Le+ F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k
Glyma.03G145800.1.p 127 RKKLRLSKQQSAFLEDSFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 181
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 126.2 | 1.4e-40 | 127 | 216 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rlsk+q+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +
Glyma.03G145800.1.p 127 RKKLRLSKQQSAFLEDSFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKELQELR-A 215
69*************************************************************************************9.5 PP
HD-ZIP_I/II 91 l 91
l
Glyma.03G145800.1.p 216 L 216
5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MELALSLGDT PKTVSLATKN DSVSLCIALA DDKRGSSYPP VQLDLLPSTP VLPFSHSHLR 60 IPWLSDALGM ERVTSEIPVR VVDDTDDGAA LSSPNSAVSS FQMDYCVRNN RKSSEGASDD 120 DENGSSRKKL RLSKQQSAFL EDSFKEHTTL NPKQKLALAK QLNLRPRQVE VWFQNRRART 180 KLKQTEVDCE YLKRCCESLT EENRRLQKEL QELRALKTCQ PFFMQLPATT LTMCPACERV 240 ATNTATGAAA AAASTTTTNN NNASAPTNNN SVSQISAAMS VDKPRILP*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 125 | 131 | SRKKLRL |
2 | 175 | 183 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031163 | 0.0 | KT031163.1 Glycine max clone HN_CCL_195 homeodomain/HOMEOBOX transcription factor (Glyma03g30200.1) mRNA, partial cds. |