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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G112600.1.p |
Common Name | GLYMA_03G112600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 160aa MW: 18270 Da PI: 10.0629 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G112600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 32.5 | 2.1e-10 | 85 | 119 | 19 | 55 |
AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
Irdp++ng +r++lg++ t+eeA a+++a+ +++g
Glyma.03G112600.1.p 85 IRDPKKNG--ARVWLGTYETEEEASLACDRAAFEMRG 119
99*99997..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 160 aa
Download sequence Send
to blast |
MATTTSCDFS SLESIQQYLL ELKHDIFQHS RVFPTMKYVI PTLSQHYSNP DLNSESVTDT 60 NKCWHAKGNT IRWRMKFTLL RNRGIRDPKK NGARVWLGTY ETEEEASLAC DRAAFEMRGS 120 KVKLNFPHLI GSHAPSKPVK VMMKASNQSL AWKGFDLKF*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G44840.1 | 2e-24 | ethylene-responsive element binding factor 13 |