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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G112000.1.p |
Common Name | GLYMA_03G112000, LOC100792115 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 198aa MW: 22364.3 Da PI: 9.274 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G112000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.5 | 6e-17 | 66 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+++AeI+dp++ n r++lg++ t+eeA a+++a k++g
Glyma.03G112000.1.p 66 RFRGVRRRP-WGKFAAEIWDPKKkN---GRVWLGTYETEEEAGLAYDRACFKMRG 116
79*******.**********86645...7************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MTNDVSCVQS YELEHDSHTL MNVSDHPNNN PFQNPTHIDD VIQLFACDTE APLAAREVYA 60 PRKWKRFRGV RRRPWGKFAA EIWDPKKKNG RVWLGTYETE EEAGLAYDRA CFKMRGSKAK 120 LNFPHLIGSH APPERVSVVA ARKPNSPEPC FLPSPPPVTE DSSQPQGLKK RRNLADLLNR 180 LAKNRSQSMS LNCNEAN*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G44840.1 | 3e-25 | ethylene-responsive element binding factor 13 |