PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G051400.1.p
Common NameGLYMA_03G051400, LOC100801120
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 347aa    MW: 38662.8 Da    PI: 6.2918
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G051400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.78.3e-3162115255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH rF++av++LGG+e+AtPk +l+lm++k+L+++hvkSHLQ++R+
  Glyma.03G051400.1.p  62 PRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKSLSIAHVKSHLQMFRS 115
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.6258118IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.5E-2858116IPR009057Homeodomain-like
SuperFamilySSF466895.02E-1460116IPR009057Homeodomain-like
TIGRFAMsTIGR015573.3E-2262117IPR006447Myb domain, plants
PfamPF002493.1E-863113IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MGESSGSQCS KTSPSNIDED DEGESEANED QSKQNNNGGS SSNSTVEENE KKIRPYVRSK  60
MPRLRWTPDL HLRFIHAVQR LGGQERATPK LVLQLMNIKS LSIAHVKSHL QMFRSKKVDD  120
RNQVFADHNS LVETGDKNIY NLSQLSMLQG YNPSQSSSFS YTNNYPSYGF GDASFGVYEK  180
LLQRPFDWSN AISSREGSSI FGEQSKIREP KDEFLSFGAH DHSLSTPTRL SHVDHTPPIN  240
IMQQIAQNLM PINPTTNQPE LKTLKRKASD HTTLDLDLSL KLNSKINDAE EGTLNNHEVD  300
STNLSLSLCS QLSSSSNPSS RLIKEAQQDR CDEQGKIMAS TLDLTI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-1763117458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.199230.0leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G051400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003520352.10.0two-component response regulator ARR18
RefseqXP_028224470.10.0two-component response regulator ARR18-like
TrEMBLA0A445L7J20.0A0A445L7J2_GLYSO; Putative Myb family transcription factor
TrEMBLK7KCY90.0K7KCY9_SOYBN; Uncharacterized protein
STRINGGLYMA03G06620.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.16e-54G2-like family protein