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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G034000.1.p |
Common Name | GLYMA_03G034000, Glyma03g04000.1, LOC100788617 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 398aa MW: 44189.4 Da PI: 9.3453 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G034000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 48.2 | 1.9e-15 | 238 | 284 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h++ ErrRRd+iN+++ eL++l+P++ K +Ka++L ++++Y+k+Lq
Glyma.03G034000.1.p 238 VHKQSERRRRDKINQRMKELQKLVPNS-----SKTDKASMLDEVIQYMKQLQ 284
699***********************8.....7******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MSQRVPNCDV DDNNNIPTTT KIPLLPNFNF ISHEVPMLGY QAAELPCKKG QPSTYKGSHG 60 NLTSTWDKPR TSGGTLESIV SQHVSENRYK LVTMDALVPC SEQQGTQKAV VSERLDACGK 120 SRFPRVVAQE EVEKRAGVVA RGTRGTTTLE LGGCKDWSVS GSETCRRELS VTFNSATKGS 180 PENTTSSGKQ CTGTTTNDDR DSISHRISQG EVPDEDYKAT KVDRSSGSNK RIKANSVVHK 240 QSERRRRDKI NQRMKELQKL VPNSSKTDKA SMLDEVIQYM KQLQAQVQMM NWMKMYTSMM 300 LPITMQQQQQ QQQLKMSMMM AQMGMGMGMS KDMVMNMNSM NIPGFPPMLP FPSFMPMAPC 360 GDQLQGTPEK SVTMDAYSTM ASLYQQLFHP PASSSKN*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 242 | 247 | ERRRRD |
2 | 243 | 248 | RRRRDK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031100 | 0.0 | KT031100.1 Glycine max clone HN_CCL_212 bHLH transcription factor (Glyma03g04000.1) mRNA, partial cds. |