PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G304600.1.p
Common NameGLYMA_02G304600, LOC100781108
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family SAP
Protein Properties Length: 475aa    MW: 52517.2 Da    PI: 8.0299
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G304600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP737.21.4e-22414721455
                  SAP   1 mssssssssseseegseggeggdass..............gesegp.sssrqraanevwpePflealatqvaidasrslGrlaaasalan 75 
                          mss+ssssss+s+ ++++++++da +              g++e++ ss+rqra+nev+peP+lealatq+a+da++++Grl+aasala+
  Glyma.02G304600.1.p   1 MSSTSSSSSSSSS-STSSSTPYDAVApdipgpstrrtggsGQFEASsSSQRQRAMNEVLPEPLLEALATQLALDAANYNGRLSAASALAI 89 
                          8888887777555.4567889999889999*********98888751578999************************************* PP

                  SAP  76 vfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaa 165
                          +fqvcstwr+vsrsdllwqrltrriWrrt++lr+tW+ ey+y+hrtarnf+t+r++++++++ ++   +d++ ++l+Crclalsd++la+
  Glyma.02G304600.1.p  90 LFQVCSTWREVSRSDLLWQRLTRRIWRRTYQLRATWQLEYMYWHRTARNFSTGRHRFFDQAVFDP---SDHH-HHLLCRCLALSDTHLAC 175
                          **********************************************************9998877...4444.79*************** PP

                  SAP 166 GfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgr 255
                          Gf+dG+vrlfdletr+hv+tfl+ h++++G+fsr+vsGivi +s+++fa+ldGdi+v+++dg+g ++arra+ Gdvvn+G+lv faG+gr
  Glyma.02G304600.1.p 176 GFVDGSVRLFDLETRAHVTTFLSLHGHLFGPFSRSVSGIVIINSSITFARLDGDIYVDNVDGPGPIQARRAVEGDVVNNGVLVGFAGTGR 265
                          ****************************************************************************************** PP

                  SAP 256 WwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGl 345
                          WwvGlyaG++Graf+iWda++ee+vfvGGsltdPe+vmGWhmltel+e+vGrvrvtere++vaCt++r+v+f++rn++v+lr++ +++G+
  Glyma.02G304600.1.p 266 WWVGLYAGIAGRAFQIWDARSEERVFVGGSLTDPETVMGWHMLTELVEAVGRVRVTEREYVVACTASRMVCFSFRNPEVLLRDVGSTMGF 355
                          ****************************************************************************************** PP

                  SAP 346 ivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyagg.....vlrvWeiekkeg.ylyslrervgev 428
                          +vssldas+eayvv++++Gv+tvrr++++e+++rfr+++ + rg+++C+n+gy+l+y+++      lrvW+ie+++g ++++l +r+g+v
  Glyma.02G304600.1.p 356 VVSSLDASQEAYVVLERNGVGTVRRASTYERLSRFRLNRlWVRGLWACMNLGYVLTYSPApspspSLRVWDIEQAIGrLCVTLGVRAGYV 445
                          **********************************************************99999999*********999************ PP

                  SAP 429 nalvaddrhvavsssdgtihlldfgaq 455
                          n+lva+drhv++ss+d++i+lldfg+q
  Glyma.02G304600.1.p 446 NSLVANDRHVSISSNDNNINLLDFGVQ 472
                          *************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813838.72E-880134IPR001810F-box domain
Gene3DG3DSA:1.20.1280.501.3E-686159No hitNo description
SuperFamilySSF509788.24E-11161343IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.109.6E-8163333IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509788.24E-11386466IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.109.6E-8421469IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MSSTSSSSSS SSSSTSSSTP YDAVAPDIPG PSTRRTGGSG QFEASSSSQR QRAMNEVLPE  60
PLLEALATQL ALDAANYNGR LSAASALAIL FQVCSTWREV SRSDLLWQRL TRRIWRRTYQ  120
LRATWQLEYM YWHRTARNFS TGRHRFFDQA VFDPSDHHHH LLCRCLALSD THLACGFVDG  180
SVRLFDLETR AHVTTFLSLH GHLFGPFSRS VSGIVIINSS ITFARLDGDI YVDNVDGPGP  240
IQARRAVEGD VVNNGVLVGF AGTGRWWVGL YAGIAGRAFQ IWDARSEERV FVGGSLTDPE  300
TVMGWHMLTE LVEAVGRVRV TEREYVVACT ASRMVCFSFR NPEVLLRDVG STMGFVVSSL  360
DASQEAYVVL ERNGVGTVRR ASTYERLSRF RLNRLWVRGL WACMNLGYVL TYSPAPSPSP  420
SLRVWDIEQA IGRLCVTLGV RAGYVNSLVA NDRHVSISSN DNNINLLDFG VQDP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G304600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518569.10.0transcriptional regulator STERILE APETALA
TrEMBLI1JJP30.0I1JJP3_SOYBN; Uncharacterized protein
STRINGGLYMA02G47470.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Representative plantOGRP9756912
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-101SAP family protein