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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.02G284300.1.p |
| Common Name | GLYMA_02G284300, LOC100784323 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 321aa MW: 36904.5 Da PI: 8.5364 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.02G284300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 161.4 | 3.5e-50 | 22 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
pGfrFhPtdeelv +yL++kve+k+l++ e ik++diyk++PwdLpk + +ekewyfF+ r +ky+++ r+nr+t sg+Wkatg dk+
Glyma.02G284300.1.p 22 LPGFRFHPTDEELVGFYLRRKVENKPLRI-ELIKQIDIYKYDPWDLPKVSSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKP 110
69***************************.89***************8777899************************************ PP
NAM 92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +e +glkk+Lv+y+g+a kg+ktdW+mhe+rl
Glyma.02G284300.1.p 111 IYCVkePHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 149
**97445566***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MDVAKLHNSD DDDDKKEDED VLPGFRFHPT DEELVGFYLR RKVENKPLRI ELIKQIDIYK 60
YDPWDLPKVS SVGEKEWYFF CIRGRKYRNS IRPNRVTGSG FWKATGIDKP IYCVKEPHEC 120
IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP PNGKTSNNPQ ANDAQEAEVW TLCRILKRFP 180
SYKKYTPNLK DSAAAPIMTK PNYPTNSSST SKTCSLESDN GKPYLTFTNS LSPLLIQQNE 240
RKPAINGHVD VERNHLFLGQ LGINVAQAPT SLSYSSFWNR HHQNNVEFAN ENWDDLTSVV 300
QFANIDPSRV SDHCKEFNRF *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-49 | 7 | 184 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-49 | 7 | 184 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-49 | 7 | 184 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-49 | 7 | 184 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 6e-49 | 7 | 184 | 3 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 6e-49 | 7 | 184 | 3 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, root caps, cotyledons, tips and margin of young leaves, senescent regions of fully expanded leaves and floral tissues, including old sepals, petals, staments, mature anthers and pollen grains. Not detected in the abscission zone of open flowers, emerging lateral roots and root meristematic zones. {ECO:0000269|PubMed:22345491}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
| Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
Plant Signal Behav, 2016. 11(6): p. e1181245
[PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
Nat Plants, 2016. 2: p. 16013
[PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
Front Plant Sci, 2017. 8: p. 214
[PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
Plant J., 2017. 92(6): p. 1106-1120
[PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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