PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.02G282900.1.p | ||||||||
Common Name | GLYMA_02G282900, LOC102661690 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 214aa MW: 24064.2 Da PI: 7.2733 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.9 | 1.5e-30 | 18 | 71 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fvea+++LGGs+kAtPk+il+ m vkgL ++h+kSHLQ+YR Glyma.02G282900.1.p 18 PRLRWTPELHQHFVEAIQSLGGSHKATPKRILQQMRVKGLRIAHIKSHLQMYRN 71 8****************************************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.705 | 14 | 74 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-27 | 15 | 72 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.24E-14 | 18 | 71 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.0E-23 | 18 | 72 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.1E-8 | 19 | 70 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MKNSERSSVR KYNKSELPRL RWTPELHQHF VEAIQSLGGS HKATPKRILQ QMRVKGLRIA 60 HIKSHLQMYR NMKGHAIVAP VDQLLEGKAK DFKICSNICP TERNLKRELH LLDYKDGLSQ 120 TSEETDYDLN QEPQSSAVLL LSDDVSNEEE NFADLSLISF SMPLISMMQS ENNKEIMRFS 180 SSTAAAAANH SVVDSSSSTP SFANNYINLD LTI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-20 | 19 | 73 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.02G282900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006575636.1 | 1e-158 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | K7KBA0 | 1e-157 | K7KBA0_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA02G45231.1 | 1e-158 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9186 | 28 | 39 | Representative plant | OGRP285 | 15 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 3e-25 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.02G282900.1.p |
Entrez Gene | 102661690 |