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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.02G278400.1.p |
Common Name | GLYMA_02G278400, LOC100527682 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HSF |
Protein Properties |
Length: 274aa MW: 31778.1 Da PI: 8.0526 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G278400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 113.5 | 1.4e-35 | 26 | 117 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91
Fl+k+y++++d+++++++sw +++++fvv + efa+++Lp+yFkh+nf+SFvRQLn+YgFkkv ++ weF++++F+kg k
Glyma.02G278400.1.p 26 FLTKTYQLVDDPHTDHIVSWGDDETTFVVRRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVAADR---------WEFANEYFRKGAK 106
9****************************************************************999.........************* PP
XXXXXXXXXXX CS
HSF_DNA-bind 92 ellekikrkks 102
+ll++i+r+k+
Glyma.02G278400.1.p 107 HLLCEIHRRKT 117
*********96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MAFTLDRCED SMVFTMESHK SVPAPFLTKT YQLVDDPHTD HIVSWGDDET TFVVRRPPEF 60 ARDLLPNYFK HNNFSSFVRQ LNTYGFKKVA ADRWEFANEY FRKGAKHLLC EIHRRKTPHH 120 YQQHYHMHDQ PPQLLQPDEN MCWIDAPPLP SPKPGTDILA ALSEDNQRLR RKNFMLLSEL 180 THMKNLYNDI IYFIQNHVSP AASYDEQRSR SAILKMVELD SSPNVIRPTK SRIMEKSLVT 240 NSSDEPNNSS VKLFGVPLCG KKRLHPGNLV QQE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |