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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.02G200500.1.p |
Common Name | GLYMA_02G200500, LOC100818164 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
B3 |
Protein Properties |
Length: 345aa MW: 39079.7 Da PI: 6.8901 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G200500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 103.4 | 1.2e-32 | 75 | 181 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82
f+k ltpsdv+k++rlv+pk++ae++ g+++ ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F
Glyma.02G200500.1.p 75 FEKPLTPSDVGKLNRLVIPKQHAEKYfplsggdsGSSECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLF 164
99****************************999877777999************************************************ PP
EE-SSSEE..EEEEE-S CS
B3 83 kldgrsefelvvkvfrk 99
++++ + ++l+++++r+
Glyma.02G200500.1.p 165 QRHRADAQRLFIGWRRR 181
*88879999******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MSTNHYTMDL PEPTLWWPHP HQQQLTLIDP DPLPLNLNND DNDNGDDNDN DENQTVTTTT 60 TGGEEEIINN KEPMFEKPLT PSDVGKLNRL VIPKQHAEKY FPLSGGDSGS SECKGLLLSF 120 EDESGKCWRF RYSYWNSSQS YVLTKGWSRY VKDKRLDAGD VVLFQRHRAD AQRLFIGWRR 180 RRQSDALPPP AHVSSRKSGG DGNSSKNEGD VGVGWTRGFY PAHHPYPTHH HHPSPYHHQQ 240 DDSLHAVRGS QGQNQRTRPV GNSSSSSSSS SRVLRLFGVN MECQPEHDDS GPSTPQCSYN 300 TNNILPSTQG TDIHSHLNFY QQQQTSNSKP PPHHMMIRHQ PYYY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 3e-50 | 68 | 181 | 1 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 3e-50 | 68 | 181 | 1 | 113 | B3 domain-containing transcription factor NGA1 |
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