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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.02G181100.1.p |
| Common Name | GLYMA_02G181100, LOC100783088 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
C2H2 |
| Protein Properties |
Length: 372aa MW: 41880.2 Da PI: 6.5353 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.02G181100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.4 | 0.00011 | 297 | 319 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F + + ++H +++
Glyma.02G181100.1.p 297 FMCRKCGKAFAVRGDWRTHEKNC 319
89*****************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MADPYSNFFS PGSFFHHYPS PNPSPHHHPY AHNFLNQNGS NINNHNTFFH FHHFQTTICS 60
SSPPSPPLRE ALPLLTLSPR NEEEQEEDDQ DQDQEILQEN ICTAMDVEEN YNNRTLHLHP 120
KGEEQDQEDT DESVTVALHI GLPSPSAAEI ASVLSSAACS TDKEQQGGHG VGNNNSNNGS 180
EDFSSSGFLS NRLNKGQYWI PTPSQILIGP TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR 240
KGPESLRGTQ PTGMLRLPCY CCSPGCRNNI DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR 300
KCGKAFAVRG DWRTHEKNCG KLWYCICGSD FKHKRSLKDH IKAFGSGHAA YGIDGFEEEE 360
EPASEVEQDN D*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392). {ECO:0000269|PubMed:17600712}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
