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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.02G157300.1.p |
| Common Name | GLYMA_02G157300, LOC100777923 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
MYB_related |
| Protein Properties |
Length: 94aa MW: 10588.8 Da PI: 8.8749 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.02G157300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 32.6 | 1.8e-10 | 10 | 56 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
g+W++ + + + +a + + ++ +Wk +ar +g g+t+ ++ks++
Glyma.02G157300.1.p 10 GSWSAKDNKAFERALAVYDKDtpdRWKDVARAVG-GKTPDEVKSHYEL 56
89********************************.***********76 PP
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Early expressed at stage two (plastochrons 7 and 8), when the floral meristem comprised a loaf-shaped bulge of cells. Expression was in the dorsal region of the floral meristem. At stage four, when sepal primordia had emerged around the meristem dome, expression could be seen in the dorsal sepal primordium. At stage five, expressed in emerging dorsal primordia of whorls two and three. In older flower buds (stages seven and eight), expression was found mainly in the dorsal petals and staminode. {ECO:0000269|PubMed:15790677}. |
| Uniprot | TISSUE SPECIFICITY: Specifically expressed in the dorsal region of developing flowers. {ECO:0000269|PubMed:15790677}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the dorsovental asymmetry of flowers. Promotes dorsal identity. {ECO:0000269|PubMed:15790677}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by both CYC and DICH. {ECO:0000269|PubMed:15790677, ECO:0000269|PubMed:16236768}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 1e-82 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
| Publications
? help Back to Top |
- Corley SB,Carpenter R,Copsey L,Coen E
Floral asymmetry involves an interplay between TCP and MYB transcription factors in Antirrhinum.
Proc. Natl. Acad. Sci. U.S.A., 2005. 102(14): p. 5068-73
[PMID:15790677] - Costa MM,Fox S,Hanna AI,Baxter C,Coen E
Evolution of regulatory interactions controlling floral asymmetry.
Development, 2005. 132(22): p. 5093-101
[PMID:16236768] - Stevenson CE, et al.
Crystallization and preliminary X-ray analysis of the RAD protein from Antirrhinum majus.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun., 2005. 61(Pt 10): p. 885-8
[PMID:16511186] - Stevenson CE, et al.
Crystal structure of the MYB domain of the RAD transcription factor from Antirrhinum majus.
Proteins, 2006. 65(4): p. 1041-5
[PMID:17044043]
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