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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.02G110100.1.p |
| Common Name | GLYMA_02G110100, LOC100792464 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
MYB |
| Protein Properties |
Length: 321aa MW: 36222.8 Da PI: 7.8427 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.02G110100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 61.8 | 1.4e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd++lv +v+++G ++W++++++ g+ R++k+c++rw +yl
Glyma.02G110100.1.p 14 KGPWTSEEDKKLVAYVEKHGHRNWRSVPAKAGLERCGKSCRLRWINYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 50.8 | 3.9e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T eEd +++++++lG++ W+ Ia++++ +Rt++++k++w++
Glyma.02G110100.1.p 67 RGNFTMEEDHTIIQLHALLGNK-WSIIAAHLP-KRTDNEIKNYWNT 110
89********************.*********.***********97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MGRIPCCEKV GLKKGPWTSE EDKKLVAYVE KHGHRNWRSV PAKAGLERCG KSCRLRWINY 60
LKPDIKRGNF TMEEDHTIIQ LHALLGNKWS IIAAHLPKRT DNEIKNYWNT NVKKRLIRMG 120
LDPITHKPIK TNTFEAYGGG HGQSEDNINM NHMAQWESAR IEAEARGSVF QAGSHSSHQP 180
QLILSKIPTQ PCFSSSDSLS TKRNTVYNMY ALVLATNHDP VLPVSTLSIP YWQTPSPVST 240
NIGRFTDTGS SLSYEENVNI TETSCQTQKI IEDYMLNSQD DDIIVAVEAF RTTRCESIQE 300
LFRGSNDVEG PNNDSFERNV *
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 3e-40 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
