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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.02G108800.1.p |
Common Name | GLYMA_02G108800, LOC100789305 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 468aa MW: 52031.4 Da PI: 7.1696 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G108800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 139 | 184 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++
Glyma.02G108800.1.p 139 RGHWRPAEDSKLKELVALHGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 184
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 191 | 234 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+
Glyma.02G108800.1.p 191 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 234
678*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MASSKCCMIS PQQNQNAPTC YPSPMGMVYA DMMGSLSLAT VSNNASSSQE SNGYSYGYAS 60 GVENARSTRW SFPFTREFLS SNFEDCSDVV VGAGDSNNNI NEKTNHNNGK FSEEESNPNE 120 NNPAGGKEVD SGHSKLCARG HWRPAEDSKL KELVALHGPQ NWNLIAEKLE GRSGKSCRLR 180 WFNQLDPRIN RRAFSEEEEE RLMQAHRIYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY 240 REQSSAYRRR RMSQPVYRRV DQNPTFVCSS RDNNASTTEP EPESSPSYYP NLNDRGVALT 300 NNMASFPSLH GVAAGAGGVV EFGSNVSPLN MTRGREAVSN TTHVGLCAQA QQQAPFDFFS 360 GGGSHDMVLE SMSQMRSRER TNESYNHHCQ LSGFYPHHPQ QYLMAMQQQL DNNNFYSFLN 420 SSSSASTTRT REPSSPCVAE IRDKVVNSDP PDGVPPPFFD FFGVGAT*
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